Welcome to therese project!

The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented.

Find the project summary page here.

Install therese

Installation is done by first installing a required package from CRAN:

install.packages(c("igraph", repos="http://cran.r-project.org/")

and then install therese directly from R-Forge:

install.packages("therese", repos="http://R-Forge.R-project.org")

or, alternatively,

install.packages("therese", repos="http://R-Forge.R-project.org", type="source")

if you are using a Mac.
In case installation from R-Forge does not work, download the package here and use installation from ZIP file in Windows GUI or for Unix users, the command line R CMD INSTALL therese_XXX.tar.gz

Do not hesitate to contact tuxette if you have a problem during the installation.

To cite the package, please use:

Villa-Vialaneix N., Vignes M., Viguerie N., San Cristobal M. (2014) Inferring networks from multiple samples with consensus LASSO. Quality Technology & Quantitative Management, 11(1), 39-60.