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Welcome to therese project!

The purpose of this package is to propose a method for inferring networks from expression data obtained in various experimental condition. The "cLasso" (consensus Lasso) method is implemented.

Install therese

Installation is done by first installing a required package from CRAN:
install.packages(c("igraph", repos="http://cran.r-project.org/")
and then install therese directly from R-Forge:
install.packages("therese", repos="http://R-Forge.R-project.org")
or, alternatively,
install.packages("therese", repos="http://R-Forge.R-project.org", type="source")
if you are using a Mac.
In case installation from R-Forge does not work, download the package here and use installation from ZIP file in Windows GUI or for Unix users, the command line R CMD INSTALL therese_XXX.tar.gz

Do not hesitate to contact tuxette if you have a problem during the installation.
To cite the package, please use:
  • Villa-Vialaneix N., Vignes M., Viguerie N., San Cristobal M. (2014) Inferring networks from multiple samples with consensus LASSO. Quality Technology & Quantitative Management, 11(1), 39-60.